Noncollagenous nature of the proteins of shark enamel

The proteins, soluble and insoluble at neutral pH, of relatively mature enamel of two different species of sharks were distinctly different from both collagen and embryonic enamel proteins and similar to the proteins isolated from mature human and bovine enamel.     

AN ABATTOIR SURVEY OF TUBERCULOSIS IN FERAL BUFFALOES

Tuberculosis lesions were found in 193 (1.7%) of 11,322 buffaloes examined during routine post-mortem inspection at 2 export abattoirs. The prevalence of tuberculosis in buffaloes supplied from 17 separate farms ranged from 0.3% to 8.22%, with the highest levels occurring on the coastal plains. Lesions were confined to one major body region in 50 of 72 randomly chosen cases of tuberculosis and to 2 or more regions in 22 cases. Thoracic lesions occurred in 65 of the 72 cases, abdominal lesions in 19, head lesions in 18 and carcase lesions in 9. In the thoracic cavity, lesions occurred most frequently in mediastinal and bronchial lymph nodes. In the head region the retropharyngeal lymph node was most frequently involved, in the abdominal cavity, the liver, and in the carcase, the deep inguinal lymph node. Tuberculosis lesions in buffaloes had a lardaceous consistency and were paler in colour and less calcified than those normally exhibited by cattle. Mycobacteria were isolated from 30 of 31 lesion samples submitted for bacteriological examination. Of the isolates, 25 were identified as Mycobacterium bovis, 3 as M. avium-intracellulare-scrofulaceum complex, one as M. fortuitum and one as M. flavescens. The M. bovis isolates from buffaloes showed minor cultural differences to those normally characteristic of bovine isolates.     

Characterization of infectious bursal disease viruses isolated in 2007 from Delmarva commercial broiler chickens

A study was performed in 2007 to isolate and characterize infectious bursal disease viruses (IBDVs) in commercial broilers grown in the Delmarva (DMV) Peninsula region of the United States. Bursae of Fabricius were collected weekly from 1 to 4 wk of age from broilers on 10 farms with a history of poor performance. Microscopic pathology was used to determine the infectious bursal disease (IBD) status of the broilers. Bursae from 1- and 2-wk-old broilers did not show IBD microscopic lesions. Moreover, broilers on 1 of the 10 farms were IBD lesion free at 3 and 4 wk of age. However, 3 of 9 and 9 of 9 farms yielded broilers with IBD-affected bursae from 3- and 4-wk-old commercial broilers, respectively. Ten IBDV isolates were recovered from 3 of 3 lesion-positive bursal pools at 3 wk of age and 7 of 9 lesion-positive bursal pools at 4 wk of age. Analysis of the viral protein (VP) 2 genes identified all isolates as serotype 1 Delaware (Del) variant viruses. Five field isolates, each representing different molecular clades of the Delaware variant viruses, were selected for further study. Experimental infection of specific-pathogen-free white leghorn chickens with isolates DMV/4813/07, DMV/4947/07, DMV/4955/07, DMV/5038/07, and DMV/5041/07 produced gross and microscopic pathology of the bursa consistent with Delaware variant infection. Monoclonal antibody testing showed DMV/4813/07, DMV/4947/07, DMV/ 4955/07, and DMV/5041/07 to be similar to previous recognized variant viruses. However, DMV/5038/07 was found to be unreactive with the monoclonal antibodies that typically recognize reference strains STC, Del E, GLS, RS593, and AL2. In a challenge of immunity study, 10-day-old progeny from breeders immunized with a commercially available inactivated IBDV vaccine containing the Del E and classic strains were protected to a lesser degree against isolate DMV/5038/07 compared to Del E challenge based on microscopic lesion scores (P < 0.01) of the bursa. This result suggests the virus is antigenically different from the Del E strain contained in the vaccine. Collectively, the monoclonal antibody and progeny challenge of immunity findings suggest DMV/5038/07 is antigenically different from the Del E strain contained in the vaccine.     

Reference ranges for laboratory parameters in ferrets

The purpose of this study was to establish reference ranges (robust methods) for 51 laboratory parameters in ferrets for use in private practice. Current literature concerning reference values in ferrets is often based on small patient numbers, methods of blood sampling not suitable for practice, and outdated laboratory methods. Blood was collected from the V saphena lateralis of 111 clinically healthy ferrets (age 11 weeks to 9 years; 61 male, 50 female). Age, sex (male or female) and fasting status were taken into consideration. Parameters evaluated included haematological parameters (packed?cell volume, haemoglobin, erythrocytes, erythrocyte indices, white blood cells, differential blood counts, platelets) (Cell-Dyn3500R; microscopical differential blood count), serum parameters (alanine aminotransferase, alkaline phosphatase, aspartate aminotransaminase, glutamate dehydrogenase, γ-glutamyltranspeptidase, lactate dehydrogenase, creatine kinase, α-amylase, lipase, cholinesterase, glucose, fructosamine, total protein, cholesterol, triglycerides, serum bile acids, bilirubin, urea, creatinine), serum electrolyte levels (calcium, phosphorus, magnesium, sodium, potassium, chloride, iron) (Hitachi 911), and serum hormone concentrations (thyroxine, cortisol, oestradiol, progesterone) (Elecsys 1010). Results differing from reference ranges reported in current literature were attributed in most cases to the use of other blood sampling methods and laboratory equipment.     

Resonance of scantlings indicates the stiffness even of small specimens of Eucalyptus from plantations

The aim of this study was to establish the relationship between the stiffness of scantlings, approaching structural size materials, and small specimens of 6-year-old Eucalyptus urophylla?×?grandis wood using a resonance technique. The correlation between the elastic modulus (E) of the scantlings in longitudinal vibration and small specimens in flexural vibration was r?=?75 when comparing the scantling values with the averaged values of the specimens per scantling. However, when the E of each single specimen was compared with its respective scantling, the coefficient of correlation decreased to r?=?0.64 in the longitudinal tests and r?=?0.61 in the flexural tests. A roughly linear correlation (r?=?0.59) between specific modulus and loss tangent was obtained for the small specimens of Eucalyptus. In short, the resonance technique rapidly provided a large, accurate data set of mechanical wood properties as required for high-throughput phenotyping in recent genetic studies.     

Coupling hysteresis analysis with sediment and hydrological connectivity in three agricultural catchments in Navarre,Spain

Purpose

Rain storm events mobilise large proportions of fine sediments in catchment systems. Sediments from agricultural catchments are often adsorbed by nutrients, heavy metals and other (in)organic pollutants that may impact downstream environments. To mitigate erosion, sediment transport and associated pollutant transport, it is crucial to know the origin of the sediment that is found in the drainage system, and therefore, it is important to understand catchment sediment dynamics throughout the continuity of runoff events.

Materials and methods

To assess the impact of the state of a catchment on the transport of fine suspended sediment to catchment outlets, an algorithm has been developed which classifies rain storm events into simple (clockwise, counter-clockwise) and compound (figure-of-eight; complex) events. This algorithm is the first tool that uses all available discharge and suspended sediment data and analyses these data automatically. A total of 797 runoff events from three experimental watersheds in Navarre (Spain) were analysed with the help of long-term, high-resolution discharge and sediment data that was collected between 2000 and 2014.

Results and discussion

Morphological complexity and in-stream vegetation structures acted as disconnecting landscape features which caused storage of sediment along the transport cascade. The occurrence of sediment storage along transport paths was therefore responsible for clockwise hysteresis due to the availability of in-stream sediment which could cause the “first flush” affect. Conversely, the catchment with steeper channel gradients and a lower stream density showed much more counter-clockwise hysteresis due to better downstream and lateral surface hydrological connectivity. In this research, hydrological connectivity is defined as the actual and potential transfer paths in a catchment. The classification of event SSC-Q hysteresis provided a seasonal benchmark value to which catchment managers can compare runoff events in order to understand the origin and locations of suspended sediment in the catchment.

Conclusions

A new algorithm uses all available discharge and suspended sediment data to assess catchment sediment dynamics. From these analyses, the catchment connectivity can be assessed which is useful to develop catchment land management.

     

Survey on the Listeria contamination of ready-to-eat food products and household environments in Vienna, Austria

Qualitative and quantitative contamination of ready-to-eat food-stuffs with the pathogen Listeria monocytogenes was studied in 1586 samples collected from 103 supermarkets (n = 946) and 61 households (n = 640) in Vienna, Austria. Seventeen groups of ready-to-eat foods were classified into three risk categories for contamination (CP1-CP3). Three to four samples were randomly collected at the retail level from each CP. Regarding the households, the sampling procedure was started with food items of CP1, and if not available, was continued with sampling of food items of CP2 and finally of CP3. Additionally, 184 environmental samples (swabs from the kitchen area, dust samples from the vacuum cleaner) and faecal samples (household members and pet animals) were included. One-hundred and twenty-four (13.1%) and 45 (4.8%) samples out of 946 food samples collected from food retailers tested positive for Listeria spp. and L. monocytogenes, respectively, with five smoked fish samples exceeding the tolerated limit of 100 CFU/g food. Food-stuffs associated with the highest risk of contamination were twice as frequently contaminated with L. monocytogenes as food-stuffs associated with a medium risk of contamination. Products showing the highest contamination rate were fish and seafood (19.4%), followed by raw meat sausages (6.3%), soft cheese (5.5%) and cooked meat products/patés (4.5%). The overall contamination rate of foods collected at the household level was more than two times lower. Only 5.6% and 1.7% of 640 food-stuffs analysed tested positive for Listeria spp. and L. monocytogenes, respectively. However, CP1 foods were rarely collected. Pulsed-field gel electrophoresis (PFGE) typing of the collected L. monocytogenes isolates revealed a high degree of diversity between the isolates, with some exceptions. PFGE typing of isolates harvested from green-veined cheese revealed a match among strains, although the manufacturer seemed to be distinguishable. Typing of household strains revealed an epidemiological link within one family. In this case, food-stuffs and the kitchen environment were contaminated by an indistinguishable isolate. In addition, the same isolate was collected from a pooled faecal sample of the household members suggesting that consumption of even low contaminated food items (<100 CFU/g) results in Listeria shedding after the passage through the gut.     

Identification of risk factors for the prevalence and persistence of Salmonella in Belgian broiler chicken flocks

According to the European Food Safety Authority, salmonellosis is still one of the main causes of infectious foodborne gastroenteritis in humans. Broilers are an important source of salmonellosis after eggs and pork. Between 1987 and 1999 the trend of human salmonellosis incidence in Belgium increased constantly. However, from 2000 until 2005 a decrease in human cases was observed, probably following the sanitary measures implemented in the poultry breeder and laying sector. In order to decrease human infections it is essential to tackle the problem at the farm level to minimize cross-contamination from farm to fork. This paper seeks to answer two questions: (i) given the Salmonella status of the farm at a certain occasion (equal to the sampling time of the flock), what are the risk factors that the farm will be Salmonella positive at a following occasion? And (ii) what are the risk factors for a farm to be persistently positive for two consecutive flocks? We used surveillance data on 6824 broiler flocks studied for Salmonella infectivity from 2005 to 2006 in Belgium. The farms were tested regularly (3 weeks before slaughter of each broiler flock) for the presence of Salmonella based on multiple faecal samples per flock on a farm yielding clustered data. Generalized estimating equations, alternating logistic regression models, and random-intercept logistic regression models were employed to analyse these correlated binary data. Our results indicated that there are many factors that influence Salmonella risk in broiler flocks, and that they interact. Accounting for interactions between risk factors leads to an improved determination of those risk factors that increase infection with Salmonella. For the conditional analysis, the risk factors found to increase the risk of Salmonella infection on a farm at a current occasion given the previous Salmonella status included: Salmonella infection of day-old chicks (of the current flock); a previously infected flock even though the farm was equipped with a hygiene place to change clothes prior to entering the broiler house; having temporary workmen when there was a separation between birds of different species; and separating birds of different species in the Walloon region relative to the Flanders region. Sanitary measures such as a cleaning and disinfecting procedure conducted by an external cleaning firm, applying the all-in all-out procedure, and hand washing decreased the risk despite their interaction with other factors. From the joint analysis, the most important factors identified for increased risk for persistent Salmonella on a farm involved the interaction between having temporary workmen when there were poultry or farmers in contact with foreign poultry or persons, and the interaction between having temporary workmen when there were poultry or farmers in contact with external poultry or persons.     

Crown and branch attributes of mid-aged Betula alnoides plantations in response to planting density

Both crown and branch characteristics greatly affect tree growth and timber quality, and their development is closely related to planting density (PD). Here crown and branch attributes of Betula alnoides were investigated in a 14-year-old experimental plantation in southern China with five planting densities ranging from 500 to 3333 stems per hectare (sph). The results showed that high PD significantly reduced crown and branch sizes. The ratios of crown diameter to stem diameter at breast height at the stand level and for dominant and co-dominant trees were almost constant regardless of PD. PD also had no significant influence on the number and angle of branches, and only planting with the highest density significantly increased branch density and mortality. Insertion angle (IA) of dead branches was greater than that of live branches and these differences were significant at the two low planting densities (833 and 500?sph). Linear mixed models revealed that branch diameter (BD) was negatively correlated with its relative height in the crown and IA. The binary-logistic regression model indicated that branch status (live or dead) was codetermined by BD and PD. These findings can help farmers cultivate high-quality wood of B. alnoides and obtain a higher economic return.